| 1984 | El mensajero de plata · operă | nedet. | 70' |
| 1985 | Concierto Nocturnal | nedet. | 15' |
| 1985 | Júbilo | nedet. | 8' |
| 1989 | Preámbulo | nedet. | 10' |
| 1990 | Idilio (Soundscape of a Rain Forest) · cor | nedet. | 7' |
| 1990 | SaSiMa | Confirmat | 13' |
| 1991 | A Joyous Overture | Confirmat | 5' |
| 1991 | Bayoán · cor | Confirmat | 40' |
| 1991 | Celebration from “Tropicalia” | Confirmat | 7' |
| 1991 | Concierto Evocativo | Confirmat | 17' |
| 1991 | Tropicalia | Confirmat | 23' |
| 1993 | We’ve Got Rhythm (from Let’s Make a Symphony) | Confirmat | 3' |
| 1994 | Evocaciones | Confirmat | 22' |
| 1995 | Imaginary Creatures (from Let’s Make a Symphony) | Confirmat | 3' |
| 1995 | Let’s Make a Symphony | Confirmat | 10' |
| 1995 | Ritmo | Confirmat | 6' |
| 1995 | Saludo | Confirmat | 4' |
| 1996 | Alegría | nedet. | 6' |
| 1996 | Alegría (arr. wind ensemble, Mark Scatterday) | nedet. | 6' |
| 1996 | Rapsodia | nedet. | 11' |
| 1997 | Diferencias | nedet. | 10' |
| 1997 | El jardín de las delicias | Confirmat | 10' |
| 1997 | Sonatina (from Let’s Make a Symphony) | Confirmat | 3' |
| 1998 | Con madera, metal y cuero | nedet. | 28' |
| 1999 | Concierto para orquesta | Confirmat | 20' |
| 2000 | Concerto for Saxophones | Confirmat | 22' |
| 2000 | Doce Bagatelas | nedet. | 20' |
| 2000 | Fandangos | Confirmat | 12' |
| 2001 | Un Recuerdo | Confirmat | 2' |
| 2002 | Beyond the Silence of Sorrow | Confirmat | 25' |
| 2002 | Concerto for Saxophones (version for wind ensemble) | nedet. | 22' |
| 2002 | Folias | nedet. | 15' |
| 2003 | Doble Concierto | nedet. | 25' |
| 2004 | Serenata | nedet. | 15' |
| 2004 | Sinfonía No. 1 | nedet. | 17' |
| 2005 | Borikén | Confirmat | 12' |
| 2005 | Sinfonía No. 2 | nedet. | 15' |
| 2005 | Sinfonía No. 3 “La Salsa” | nedet. | 23' |
| 2005 | Sinfonía No. 3 “La Salsa” (arr. wind ensemble, Mark Scatterday) | nedet. | 23' |
| 2006 | Bongo+ | nedet. | 20' |
| 2006 | Güell Concert | nedet. | 15' |
| 2006 | Missa Latina (Pro Pace) · cor | nedet. | 75' |
| 2006 | Missa Latina (Pro Pace) — two pianos and percussion version · cor | nedet. | 75' |
| 2006 | The Bacchae | nedet. | 12' |
| 2007 | Carnaval | nedet. | 18' |
| 2007 | Poema y Danza | nedet. | 11' |
| 2007 | Poema y Danza (version for two solo oboes, winds, contrabass and marimba) | nedet. | 11' |
| 2008 | Concierto de Cámara | nedet. | 22' |
| 2009 | Sinfonía No. 4 | nedet. | 20' |
| 2012 | Carnaval (arr. wind ensemble, Mark Scatterday) | nedet. | 18' |
| 2012 | El Baile | nedet. | 9' |
| 2012 | Navidad en la montaña | nedet. | 30' |
| 2013 | Mambo Metálico | nedet. | 6' |
| 2013 | Montuno | nedet. | 6' |
| 2013 | Montuno (band version) | Confirmat | 6' |
| 2014 | Rapsódico | nedet. | 9' |
| 2015 | Loíza | nedet. | 9' |
| 2015 | Sinfonía No. 5 “Río Grande de Loíza” · cor | nedet. | 25' |
| 2016 | Caribbean Rhapsody | nedet. | 9' |
| 2016 | Concierto Virtual (pre-recorded piano) | nedet. | 14' |
| 2016 | Concierto Virtual (Yamaha Disklavier) | nedet. | 14' |
| 2017 | Dos piezas para orquesta | Confirmat | 11' |
| 2019 | Near to the End | nedet. | 8' |
| 2019 | Salseando | nedet. | 18' |
| 2020 | Sinfonietta | nedet. | 16' |
| 2021 | Concierto para violín y orquesta “A la memoria de una niña valiente” | Confirmat | 25' |
| 2021 | Sinfonía No. 6 | Confirmat | 22' |
| 2024 | Sinfonía No. 7 | Confirmat | 25' |
| — | Concerto for Viola | nedet. | 22' |
| — | Cuentos | nedet. | 12' |
| — | Fandangos (arr. wind ensemble, Mark Scatterday) | nedet. | 12' |
| — | Fanfarría | nedet. | 3' |
| — | Ficciones | Confirmat | 22' |
| — | La Lira (Juan Morel Campos, orch. Sierra) | Confirmat | 11' |
| — | Prelude, Habanera and Perpetual Motion (orchestral version) | nedet. | 13' |